Archive for March, 2008

Phyloinformatics Summer of Code is on for 2008

Posted in Open Source, Phyloinformatics, Summer of Code with tags , , , on March 30, 2008 by drycafe

GSoC Logo 2008After we participated in the Google Summer of Code™ program as a mentoring organization in 2007, we pulled together an application for this year, too — and we got accepted again! So the Phyloinformatics Summer of Code, as we are calling our program in reference to the emphasis on phyloinformatics, has been on for 2008 since March 17, when Google published the list of accepted organizations. The period during which students can apply opened on March 24, and was originally slated to end only one week later, on March 31.

The latest news is that Google may extend the application deadline for students by one week. We’ll hear the final decision on this early tomorrow morning (Pacific Time, obviously – so probably no news on this on the East Coast before noon). So if you are a student enrolled at a university in a graduate or undergraduate program, you are interested in evolutionary or comparative biology, and you have always wanted to get involved in a bioinformatics open-source software project or even possibly help found one, here is your chance for likely another week, and Google will even pay you a stipend.

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R-Phylo launches on the Ides of March

Posted in Open Source, Phylogenetics, Phyloinformatics with tags , , , , on March 18, 2008 by drycafe

R-Phylo LogoOn March 14, 2008, the website R-phylo.org and the Special Interest Group (SIG) mailing list R-sig-phylo launched. Or, more precisely, their existence was announced on several channels (EvolDirEcolog) hopefully reaching as many as possible of the community that we have created the site for: developers and users of phylogenetic and comparative methods in R. R is the open-source clone of S/S-plus, and a powerful statistics platform and programming language at the same time. As Samantha Price, a postdoc at NESCent and one of the driving forces behind the site, writes in the announcement:

The wiki currently contains information on analyses and packages available in R and provides step-by-step tutorials for those just getting started.  We strongly encourage new users, experienced users and developers to both use and modify this resource to create a thriving comparative methods in R community.       

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